Gene: SI003G42020 (Setaria italica)

Overview top

Gene Identifier
SI003G42020
Transcript Identifier
SI003G42020.1
Gene Type
Coding gene
Location
scaffold_3 : 50552887-50558737 : positive

Family

Gene family
HOM03M000349
(169 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Carotenoid 9,10(9',10')-cleavage dioxygenase 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi021680m
tidSi021680m
idPAC:19700758
GeneNameSi021680m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT3G63520
GO:0016118ISOPLAZA Integrative Orthologycarotenoid catabolic processAT3G63520
GO:0016121ISOPLAZA Integrative Orthologycarotene catabolic processAT3G63520
GO:0016124ISOPLAZA Integrative Orthologyxanthophyll catabolic processAT3G63520

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0045549ISOPLAZA Integrative Orthology9-cis-epoxycarotenoid dioxygenase activityAT3G63520
GO:0016702IEAPLAZA Homologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenHOM03M000349

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT3G63520
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT3G63520
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT3G63520
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT3G63520
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT3G63520
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT3G63520
GO:0009536IEAPLAZA HomologyplastidHOM03M000349

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004294Carotenoid oxygenase

Mapman id Description
17.1.1.1.10hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase
No SignalP domains detected for this gene.