Gene: SI003G25820 (Setaria italica)

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Gene Identifier
SI003G25820
Transcript Identifier
SI003G25820.1
Gene Type
Coding gene
Location
scaffold_3 : 21978558-21981181 : positive

Family

Gene family
HOM03M001360
(55 genes in 16 species)
specific family
Subfamily
ORTHO03M007871
(5 genes in 5 species)
specific family

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Descriptions

Description (AnnoMine)
Isoamylase 2, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi021452m
tidSi021452m
idPAC:19699331
GeneNameSi021452m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process
GO:0010021ISOPLAZA Integrative Orthologyamylopectin biosynthetic processAT1G03310

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553IEAGenome Projecthydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824IEAInterProcatalytic activity
GO:0019156ISOPLAZA Integrative Orthologyisoamylase activityAT1G03310
GO:0043169IEAPLAZA Homologycation bindingHOM03M001360

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G03310

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004193Glycoside hydrolase, family 13, N-terminal
IPR017853Glycoside hydrolase, superfamily
IPR014756Immunoglobulin E-set
IPR015902Glycoside hydrolase, family 13
IPR013783Immunoglobulin-like fold
IPR013781Glycoside hydrolase, catalytic domain
IPR013780Glycosyl hydrolase, family 13, all-beta

Mapman id Description
2.1.2.4major CHO metabolism.synthesis.starch.debranching
No SignalP domains detected for this gene.