PLAZA 3.0 Monocots gene overview : SI003G20930

Gene: SI003G20930 (Setaria italica)

Overview

Gene Identifier: SI003G20930
Transcript Identifier: SI003G20930.1
Gene Type: Coding gene
Location: scaffold_3 : 16030034-16034394 : negative

Family

Gene family: HOM03M000449
(141 genes in 16 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): TOM1-like protein 2

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Si021478m
tid	Si021478m
id	PAC:19697845
GeneName	Si021478m.g

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006886	IEA	Genome Project	intracellular protein transport

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005622	IEA	Genome Project	intracellular

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR008942	ENTH/VHS
IPR002014	VHS
IPR018205	VHS subgroup
IPR004152	GAT

Mapman id	Description
31.4	cell.vesicle transport

No SignalP domains detected for this gene.