Gene: SI003G11860 (Setaria italica)

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Gene Identifier
SI003G11860
Transcript Identifier
SI003G11860.1
Gene Type
Coding gene
Location
scaffold_3 : 8035576-8039695 : negative

Family

Gene family
HOM03M000582
(115 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi022477m
tidSi022477m
idPAC:19701932
GeneNameSi022477m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0044237IEAGenome Projectcellular metabolic process
GO:0006012IEAGenome Projectgalactose metabolic process
GO:0042546ISOPLAZA Integrative Orthologycell wall biogenesisAT4G23920 AT1G64440
GO:0010306ISOPLAZA Integrative Orthologyrhamnogalacturonan II biosynthetic processAT1G64440
GO:0010246ISOPLAZA Integrative Orthologyrhamnogalacturonan I biosynthetic processAT1G64440
GO:0009969ISOPLAZA Integrative Orthologyxyloglucan biosynthetic processAT1G64440
GO:0009832ISOPLAZA Integrative Orthologyplant-type cell wall biogenesisAT1G64440
GO:0010053ISOPLAZA Integrative Orthologyroot epidermal cell differentiationAT1G64440

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0050662IEAGenome Projectcoenzyme binding
GO:0003978IEAGenome ProjectUDP-glucose 4-epimerase activity
GO:0046983ISOPLAZA Integrative Orthologyprotein dimerization activityAT4G23920 AT4G10960 AT1G64440
GO:0016857IEAPLAZA Homologyracemase and epimerase activity, acting on carbohydrates and derivativesHOM03M000582
GO:0016854IEAPLAZA Homologyracemase and epimerase activityHOM03M000582

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G23920
GO:0005795ISOPLAZA Integrative OrthologyGolgi stackAT1G64440

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR025308UDP-glucose 4-epimerase C-terminal domain
IPR005886UDP-glucose 4-epimerase GalE
IPR001509NAD-dependent epimerase/dehydratase
IPR016040NAD(P)-binding domain

Mapman id Description
10.1.2cell wall.precursor synthesis.UGE
No SignalP domains detected for this gene.