Gene: SI003G03640 (Setaria italica)

Overview top

Gene Identifier
SI003G03640
Transcript Identifier
SI003G03640.1
Gene Type
Coding gene
Location
scaffold_3 : 2223342-2225428 : positive

Family

Gene family
HOM03M000731
(95 genes in 16 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine)
40S ribosomal protein S4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi022971m
tidSi022971m
idPAC:19697836
GeneNameSi022971m.g

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006412IEAGenome Projecttranslation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEAGenome ProjectRNA binding
GO:0003735IEAGenome Projectstructural constituent of ribosome
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G07090

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005840IEAGenome Projectribosome
GO:0005622IEAGenome Projectintracellular
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT5G58420 AT5G07090 AT2G17360
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G58420 AT2G17360
GO:0022627ISOPLAZA Integrative Orthologycytosolic small ribosomal subunitAT5G58420 AT5G07090 AT2G17360
GO:0016020ISOPLAZA Integrative OrthologymembraneAT5G58420 AT5G07090
GO:0022626ISOPLAZA Integrative Orthologycytosolic ribosomeAT5G58420 AT5G07090 AT2G17360
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT5G58420 AT5G07090
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G07090 AT2G17360
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G07090 AT2G17360

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR018199Ribosomal protein S4e, N-terminal, conserved site
IPR000876Ribosomal protein S4e
IPR002942RNA-binding S4 domain
IPR013845Ribosomal protein S4e, central region
IPR005824KOW
IPR013843Ribosomal protein S4e, N-terminal

Mapman id Description
29.2.1.2.1.4protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4
No SignalP domains detected for this gene.