PLAZA 3.0 Monocots gene overview : SI003G01210

Gene: SI003G01210 (Setaria italica)

Overview

Gene Identifier: SI003G01210
Transcript Identifier: SI003G01210.1
Gene Type: Coding gene
Location: scaffold_3 : 654487-663454 : positive

Family

Gene family: HOM03M001163
(63 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): Valine--tRNA ligase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Si021065m
tid	Si021065m
id	PAC:19699520
GeneName	Si021065m.g

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006418	IEA	Genome Project	tRNA aminoacylation for protein translation
GO:0006438	IEA	Genome Project	valyl-tRNA aminoacylation
GO:0006412	IEA	Genome Project	translation

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0000166	IEA	Genome Project	nucleotide binding
GO:0004812	IEA	Genome Project	aminoacyl-tRNA ligase activity
GO:0005524	IEA	Genome Project	ATP binding
GO:0004832	IEA	Genome Project	valine-tRNA ligase activity
GO:0002161	IEA	InterPro	aminoacyl-tRNA editing activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA	Genome Project	cytoplasm

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR002303	Valine-tRNA ligase
IPR013155	Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
IPR002300	Aminoacyl-tRNA synthetase, class Ia
IPR010978	tRNA-binding arm
IPR019499	Valyl-tRNA synthetase, tRNA-binding arm
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site

Mapman id	Description
29.1.9	protein.aa activation.valine-tRNA ligase

No SignalP domains detected for this gene.