Gene: SI002G45100 (Setaria italica)

Overview top

Gene Identifier
SI002G45100
Transcript Identifier
SI002G45100.1
Gene Type
Coding gene
Location
scaffold_2 : 48978859-48986670 : positive

Family

Gene family
HOM03M004924
(20 genes in 16 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine)
Vancomycin/teicoplanin A-type resistance protein VanA
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi028842m
tidSi028842m
idPAC:19711330
GeneNameSi028842m.g

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009252IEAGenome Projectpeptidoglycan biosynthetic process
GO:0006023IEAPLAZA Homologyaminoglycan biosynthetic processHOM03M004924
GO:0006024IEAPLAZA Homologyglycosaminoglycan biosynthetic processHOM03M004924

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008716IEAGenome ProjectD-alanine-D-alanine ligase activity
GO:0005524IEAInterProATP binding
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618IEAGenome Projectcell wall
GO:0005737IEAPLAZA HomologycytoplasmHOM03M004924

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016185Pre-ATP-grasp domain
IPR011095D-alanine--D-alanine ligase, C-terminal
IPR013816ATP-grasp fold, subdomain 2
IPR011127D-alanine--D-alanine ligase, N-terminal domain
IPR011761ATP-grasp fold
IPR000291D-alanine--D-alanine ligase/VANA/B/C, conserved site

Mapman id Description
35.1not assigned.no ontology
No SignalP domains detected for this gene.