PLAZA 3.0 Monocots gene overview : SI002G43850

Gene: SI002G43850 (Setaria italica)

Overview

Gene Identifier: SI002G43850
Transcript Identifier: SI002G43850.1
Gene Type: Coding gene
Location: scaffold_2 : 48000754-48003933 : negative

Family

Gene family: HOM03M004412
(21 genes in 14 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine): actin-capping protein subunit alpha-2

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Si030208m
tid	Si030208m
id	PAC:19710650
GeneName	Si030208m.g

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0030036	IEA	Genome Project	actin cytoskeleton organization
GO:0007015	ISO	PLAZA Integrative Orthology	actin filament organization	AT3G05520
GO:0051693	ISO	PLAZA Integrative Orthology	actin filament capping	AT3G05520

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003779	IEA	Genome Project	actin binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0008290	IEA	Genome Project	F-actin capping protein complex
GO:0071203	IEA	InterPro	WASH complex
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G05520

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR017865	F-actin capping protein, alpha subunit, conserved site
IPR002189	F-actin-capping protein subunit alpha

Mapman id	Description
31.1	cell.organisation

No SignalP domains detected for this gene.