Gene: SI002G29700 (Setaria italica)

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Gene Identifier
SI002G29700
Transcript Identifier
SI002G29700.1
Gene Type
Coding gene
Location
scaffold_2 : 38628668-38630731 : negative

Family

Gene family
HOM03M000303
(182 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
SCF ubiquitin ligase complex protein
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi031276m
tidSi031276m
idPAC:19710226
GeneNameSi031276m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IEAGenome Projectubiquitin-dependent protein catabolic process
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G42190
GO:0007067ISOPLAZA Integrative OrthologymitosisAT1G75950
GO:0000226ISOPLAZA Integrative Orthologymicrotubule cytoskeleton organizationAT1G75950
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT1G75950
GO:0045910ISOPLAZA Integrative Orthologynegative regulation of DNA recombinationAT1G75950
GO:0007140ISOPLAZA Integrative Orthologymale meiosisAT1G75950
GO:0044265IEAPLAZA Homologycellular macromolecule catabolic processHOM03M000303
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03M000303
GO:0043632IEAPLAZA Homologymodification-dependent macromolecule catabolic processHOM03M000303
GO:0030163IEAPLAZA Homologyprotein catabolic processHOM03M000303
GO:0051603IEAPLAZA Homologyproteolysis involved in cellular protein catabolic processHOM03M000303
GO:0019941IEAPLAZA Homologymodification-dependent protein catabolic processHOM03M000303
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03M000303
GO:0044257IEAPLAZA Homologycellular protein catabolic processHOM03M000303

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G42190 AT1G75950

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G75950
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G75950
GO:0009524ISOPLAZA Integrative OrthologyphragmoplastAT1G75950
GO:0005819ISOPLAZA Integrative OrthologyspindleAT1G75950
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G75950
GO:0000151ISOPLAZA Integrative Orthologyubiquitin ligase complexAT1G75950

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011333BTB/POZ fold
IPR001232SKP1 component
IPR016072SKP1 component, dimerisation
IPR016073SKP1 component, POZ domain

Mapman id Description
29.5.11.4.3.1protein.degradation.ubiquitin.E3.SCF.SKP
No SignalP domains detected for this gene.