Gene: SI002G28610 (Setaria italica)

Overview top

Gene Identifier
SI002G28610
Transcript Identifier
SI002G28610.1
Gene Type
Coding gene
Location
scaffold_2 : 37696826-37699909 : positive

Family

Gene family
HOM03M001683
(46 genes in 15 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Hydroxymethylglutaryl-CoA synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi029736m
tidSi029736m
idPAC:19711079
GeneNameSi029736m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008299IEAGenome Projectisoprenoid biosynthetic process
GO:0008152IEAInterPrometabolic process
GO:0019287ISOPLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathwayAT4G11820

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004421IEAGenome Projecthydroxymethylglutaryl-CoA synthase activity
GO:0003824IEAInterProcatalytic activity
GO:0003985ISOPLAZA Integrative Orthologyacetyl-CoA C-acetyltransferase activityAT4G11820

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT4G11820
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G11820

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016038Thiolase-like, subgroup
IPR013528Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
IPR000590Hydroxymethylglutaryl-coenzyme A synthase, active site
IPR013746Hydroxymethylglutaryl-coenzyme A synthase C-terminal
IPR016039Thiolase-like
IPR010122Hydroxymethylglutaryl-CoA synthase, eukaryotic

Mapman id Description
16.1.2.2secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase
No SignalP domains detected for this gene.