Gene: SI002G24610 (Setaria italica)

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Gene Identifier
SI002G24610
Transcript Identifier
SI002G24610.1
Gene Type
Coding gene
Location
scaffold_2 : 34492810-34499361 : positive

Family

Gene family
HOM03M002426
(35 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4a
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi028901m
tidSi028901m
idPAC:19713631
GeneNameSi028901m.g

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016428IEAInterProtRNA (cytosine-5-)-methyltransferase activity
GO:0003723IEAInterProRNA binding
GO:0008168IEAInterPromethyltransferase activity

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023270tRNA (C5-cytosine) methyltransferase, NCL1
IPR023267RNA (C5-cytosine) methyltransferase
IPR001678Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
IPR018314Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site

Mapman id Description
27.4RNA.RNA binding
No SignalP domains detected for this gene.