Gene: SI002G16660 (Setaria italica)

Overview top

Gene Identifier
SI002G16660
Transcript Identifier
SI002G16660.1
Gene Type
Coding gene
Location
scaffold_2 : 24103678-24109433 : negative

Family

Gene family
HOM03M004381
(22 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
topoisomerase 6 subunit B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi029103m
tidSi029103m
idPAC:19712792
GeneNameSi029103m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006265IEAGenome ProjectDNA topological change
GO:0010026ISOPLAZA Integrative Orthologytrichome differentiationAT3G20780
GO:0007389ISOPLAZA Integrative Orthologypattern specification processAT3G20780
GO:0042023ISOPLAZA Integrative OrthologyDNA endoreduplicationAT3G20780
GO:0009741ISOPLAZA Integrative Orthologyresponse to brassinosteroidAT3G20780

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003918IEAGenome ProjectDNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005524IEAGenome ProjectATP binding
GO:0003676IEAInterPronucleic acid binding
GO:0042802ISOPLAZA Integrative Orthologyidentical protein bindingAT3G20780
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT3G20780
GO:0061505IEAPLAZA HomologyDNA topoisomerase II activityHOM03M004381

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005694IEAGenome Projectchromosome

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR010979Ribosomal protein S13-like, H2TH
IPR005734DNA topoisomerase VI, subunit B
IPR020568Ribosomal protein S5 domain 2-type fold
IPR015320DNA topoisomerase VI, subunit B, transducer

Mapman id Description
17.3.3hormone metabolism.brassinosteroid.induced-regulated-responsive-activated
No SignalP domains detected for this gene.