PLAZA 3.0 Monocots gene overview : SI001G35220

Gene: SI001G35220 (Setaria italica)

Overview

Gene Identifier: SI001G35220
Transcript Identifier: SI001G35220.1
Gene Type: Coding gene
Location: scaffold_1 : 39458798-39461773 : negative

Family

Gene family: HOM03M001403
(54 genes in 16 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine): Replication factor C

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Si017595m
tid	Si017595m
id	PAC:19686689
GeneName	Si017595m.g

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006260	IEA	Genome Project	DNA replication
GO:0031348	ISO	PLAZA Integrative Orthology	negative regulation of defense response	AT1G77470

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IEA	Genome Project	ATP binding
GO:0003689	IEA	Genome Project	DNA clamp loader activity
GO:0017111	IEA	InterPro	nucleoside-triphosphatase activity
GO:0000166	IEA	InterPro	nucleotide binding
GO:0003677	IEA	InterPro	DNA binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005663	IEA	Genome Project	DNA replication factor C complex

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003593	AAA+ ATPase domain
IPR013748	Replication factor C, C-terminal domain
IPR003959	ATPase, AAA-type, core
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
28.1	DNA.synthesis/chromatin structure

No SignalP domains detected for this gene.