Gene: SI001G35000 (Setaria italica)

Overview top

Gene Identifier
SI001G35000
Transcript Identifier
SI001G35000.1
Gene Type
Coding gene
Location
scaffold_1 : 39333753-39340437 : positive

Family

Gene family
HOM03M001537
(50 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Putative transcription elongation factor SPT5 homolog 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi016191m
tidSi016191m
idPAC:19688407
GeneNameSi016191m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0006412IEAInterProtranslation
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M001537
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M001537

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735IEAInterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0005840IEAInterProribosome

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005824KOW
IPR006645Transcription antitermination protein NusG, N-terminal domain
IPR005825Ribosomal protein L24/L26, conserved site
IPR005100Transcription elongation factor Spt5, NGN domain
IPR008991Translation protein SH3-like domain

Mapman id Description
27.3.52RNA.regulation of transcription.Global transcription factor group
No SignalP domains detected for this gene.