Gene: SI001G31490 (Setaria italica)

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Gene Identifier
SI001G31490
Transcript Identifier
SI001G31490.1
Gene Type
Coding gene
Location
scaffold_1 : 36767530-36768336 : negative

Family

Gene family
HOM03M000215
(230 genes in 16 species)
specific family
Subfamily
ORTHO03M009016
(5 genes in 5 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
transcription factor Y subunit B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi020091m
tidSi020091m
idPAC:19687412
GeneNameSi020091m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT5G47670 AT1G21970
GO:0009738ISOPLAZA Integrative Orthologyabscisic acid-activated signaling pathwayAT5G47670 AT1G21970
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G21970
GO:0045723ISOPLAZA Integrative Orthologypositive regulation of fatty acid biosynthetic processAT1G21970
GO:0009785ISOPLAZA Integrative Orthologyblue light signaling pathwayAT1G21970
GO:0010262ISOPLAZA Integrative Orthologysomatic embryogenesisAT1G21970
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000215

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0046982IEAInterProprotein heterodimerization activity
GO:0033613ISOPLAZA Integrative Orthologyactivating transcription factor bindingAT5G47670
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G47670 AT1G21970
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03M000215

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0005634IEAInterPronucleus

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009072Histone-fold
IPR003957Transcription factor, NFYB/HAP3 subunit
IPR003958Transcription factor CBF/NF-Y/archaeal histone
IPR003956Transcription factor, NFYB/HAP3, conserved site

Mapman id Description
27.3.15RNA.regulation of transcription.CCAAT box binding factor family, HAP3
No SignalP domains detected for this gene.