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WorkbenchGene: SI001G26250 (Setaria italica)
Overview 
- Gene Identifier
- SI001G26250
- Transcript Identifier
- SI001G26250.1
- Gene Type
- Coding gene
- Location
- scaffold_1 : 32705136-32707540 : negative
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description (AnnoMine)
-
Protein YABBY 5
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| pid | Si018146m |
| tid | Si018146m |
| id | PAC:19689418 |
| GeneName | Si018146m.g |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0045165 | ISO | PLAZA Integrative Orthology | cell fate commitment | AT2G45190 |
| GO:0009933 | ISO | PLAZA Integrative Orthology | meristem structural organization | AT2G45190 |
| GO:0010450 | ISO | PLAZA Integrative Orthology | inflorescence meristem growth | AT2G45190 |
| GO:0010093 | ISO | PLAZA Integrative Orthology | specification of floral organ identity | AT2G45190 |
| GO:0010159 | ISO | PLAZA Integrative Orthology | specification of organ position | AT2G45190 |
| GO:0010158 | ISO | PLAZA Integrative Orthology | abaxial cell fate specification | AT2G45190 |
| GO:0010154 | ISO | PLAZA Integrative Orthology | fruit development | AT2G45190 |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT2G45190 |
| GO:0030154 | IEA | PLAZA Homology | cell differentiation | HOM03M000503 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G45190 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G45190 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 27.3.10 | RNA.regulation of transcription.C2C2(Zn) YABBY family |
No SignalP domains detected for this gene.