PLAZA 3.0 Monocots gene overview : SI001G24970

Gene: SI001G24970 (Setaria italica)

Overview

Gene Identifier: SI001G24970
Transcript Identifier: SI001G24970.1
Gene Type: Coding gene
Location: scaffold_1 : 31601545-31602453 : negative

Family

Gene family: HOM03M006330
(17 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): Phosphatidylinositol N-acetylglucosaminyltransferase subunit C

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Si017910m
tid	Si017910m
id	PAC:19687830
GeneName	Si017910m.g

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006506	IEA	Genome Project	GPI anchor biosynthetic process
GO:0009860	ISO	PLAZA Integrative Orthology	pollen tube growth	AT2G34980
GO:0009846	ISO	PLAZA Integrative Orthology	pollen germination	AT2G34980

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0017176	IEA	Genome Project	phosphatidylinositol N-acetylglucosaminyltransferase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016021	IEA	Genome Project	integral to membrane
GO:0016020	ISO	PLAZA Integrative Orthology	membrane	AT2G34980
GO:0000506	ISO	PLAZA Integrative Orthology	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex	AT2G34980

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009450	Phosphatidylinositol N-acetylglucosaminyltransferase subunit C

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.