Gene: SI001G05480 (Setaria italica)

Overview top

Gene Identifier
SI001G05480
Transcript Identifier
SI001G05480.1
Gene Type
Coding gene
Location
scaffold_1 : 5009064-5011729 : negative

Family

Gene family
HOM03M006706
(16 genes in 14 species)
specific family

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Descriptions

Description (AnnoMine)
of RNA polymerase II transcription subunit 18
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi018318m
tidSi018318m
idPAC:19688094
GeneNameSi018318m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006357IEAGenome Projectregulation of transcription from RNA polymerase II promoter
GO:0048833ISOPLAZA Integrative Orthologyspecification of floral organ numberAT2G22370
GO:0048510ISOPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT2G22370
GO:0048443ISOPLAZA Integrative Orthologystamen developmentAT2G22370
GO:0048442ISOPLAZA Integrative Orthologysepal developmentAT2G22370
GO:0048441ISOPLAZA Integrative Orthologypetal developmentAT2G22370
GO:0048440ISOPLAZA Integrative Orthologycarpel developmentAT2G22370
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT2G22370
GO:0010219ISOPLAZA Integrative Orthologyregulation of vernalization responseAT2G22370
GO:0048832IEAPLAZA Homologyspecification of organ numberHOM03M006706

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0001104IEAGenome ProjectRNA polymerase II transcription cofactor activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016592IEAGenome Projectmediator complex

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019095Mediator complex, subunit Med18, metazoa/fungi

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.