Gene: SI001G02770 (Setaria italica)

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Gene Identifier
SI001G02770
Transcript Identifier
SI001G02770.1
Gene Type
Coding gene
Location
scaffold_1 : 2361821-2363390 : negative

Family

Gene family
HOM03M000933
(76 genes in 16 species)
specific family
Subfamily
ORTHO03M000315
(17 genes in 12 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Probable rhamnose biosynthetic enzyme 3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi019226m
tidSi019226m
idPAC:19687414
GeneNameSi019226m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0044237IEAGenome Projectcellular metabolic process
GO:0010192ISOPLAZA Integrative Orthologymucilage biosynthetic processAT1G53500
GO:0010214ISOPLAZA Integrative Orthologyseed coat developmentAT1G53500
GO:0010253ISOPLAZA Integrative OrthologyUDP-rhamnose biosynthetic processAT1G53500
GO:0046379IEAPLAZA Homologyextracellular polysaccharide metabolic processHOM03M000933
GO:0045226IEAPLAZA Homologyextracellular polysaccharide biosynthetic processHOM03M000933

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0050662IEAGenome Projectcoenzyme binding
GO:0010280ISOPLAZA Integrative OrthologyUDP-L-rhamnose synthase activityAT1G53500
GO:0010489ISOPLAZA Integrative OrthologyUDP-4-keto-6-deoxy-glucose-3,5-epimerase activityAT1G53500
GO:0010490ISOPLAZA Integrative OrthologyUDP-4-keto-rhamnose-4-keto-reductase activityAT1G53500
GO:0050377ISOPLAZA Integrative OrthologyUDP-glucose 4,6-dehydratase activityAT1G53500
GO:0008831IEAPLAZA HomologydTDP-4-dehydrorhamnose reductase activityHOM03M000933

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G53500

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001509NAD-dependent epimerase/dehydratase
IPR016040NAD(P)-binding domain

Mapman id Description
10.1.10cell wall.precursor synthesis.UDP-glucose 4,6-dehydratase
No SignalP domains detected for this gene.