PLAZA 3.0 Monocots gene overview : SI001G01350

Gene: SI001G01350 (Setaria italica)

Overview

Gene Identifier: SI001G01350
Transcript Identifier: SI001G01350.1
Gene Type: Coding gene
Location: scaffold_1 : 991779-994081 : positive

Family

Gene family: HOM03M002148
(39 genes in 16 species)
specific family
Subfamily: ORTHO03M018553
(3 genes in 3 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine): protein L21

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Si018321m
tid	Si018321m
id	PAC:19690347
GeneName	Si018321m.g

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006412	IEA	Genome Project	translation
GO:0009409	ISO	PLAZA Integrative Orthology	response to cold	AT1G35680
GO:0009658	ISO	PLAZA Integrative Orthology	chloroplast organization	AT1G35680
GO:0009790	ISO	PLAZA Integrative Orthology	embryo development	AT1G35680
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT1G35680
GO:0010027	ISO	PLAZA Integrative Orthology	thylakoid membrane organization	AT1G35680

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003723	IEA	Genome Project	RNA binding
GO:0003735	IEA	Genome Project	structural constituent of ribosome

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005622	IEA	Genome Project	intracellular
GO:0005840	IEA	Genome Project	ribosome
GO:0009941	ISO	PLAZA Integrative Orthology	chloroplast envelope	AT1G35680
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G35680
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G35680
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT1G35680

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR018258	Ribosomal protein L21, conserved site
IPR001787	Ribosomal protein L21

Mapman id	Description
29.2.1.1.1.2.21	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21

No SignalP domains detected for this gene.