PLAZA 3.0 Monocots gene overview : SI001G00400

Gene: SI001G00400 (Setaria italica)

Overview

Gene Identifier: SI001G00400
Transcript Identifier: SI001G00400.1
Gene Type: Coding gene
Location: scaffold_1 : 262056-265656 : positive

Family

Gene family: HOM03M005227
(19 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): NO-associated protein 1, chloroplastic/mitochondrial

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Si016825m
tid	Si016825m
id	PAC:19690170
GeneName	Si016825m.g

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006809	ISO	PLAZA Integrative Orthology	nitric oxide biosynthetic process	AT3G47450
GO:0006979	ISO	PLAZA Integrative Orthology	response to oxidative stress	AT3G47450
GO:0009651	ISO	PLAZA Integrative Orthology	response to salt stress	AT3G47450
GO:0009657	ISO	PLAZA Integrative Orthology	plastid organization	AT3G47450
GO:0010027	ISO	PLAZA Integrative Orthology	thylakoid membrane organization	AT3G47450
GO:0010322	ISO	PLAZA Integrative Orthology	regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	AT3G47450
GO:0048366	ISO	PLAZA Integrative Orthology	leaf development	AT3G47450
GO:0051246	ISO	PLAZA Integrative Orthology	regulation of protein metabolic process	AT3G47450
GO:0010193	ISO	PLAZA Integrative Orthology	response to ozone	AT3G47450

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005525	IEA	InterPro	GTP binding
GO:0003924	ISO	PLAZA Integrative Orthology	GTPase activity	AT3G47450
GO:0004517	ISO	PLAZA Integrative Orthology	nitric-oxide synthase activity	AT3G47450

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT3G47450
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT3G47450

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006073	GTP binding domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.