PLAZA 3.0 Monocots gene overview : SB10G003940

Gene: SB10G003940 (Sorghum bicolor)

Overview

Gene Identifier: SB10G003940
Transcript Identifier: SB10G003940.1
Gene Type: Coding gene
Location: chr_10 : 3464074-3465644 : positive

Family

Gene family: HOM03M000266
(200 genes in 14 species)
specific family
Subfamily: ORTHO03M008339
(5 genes in 5 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): TWIN SISTER of FT

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	5030888
tid	5030888

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009911	ISO	PLAZA Integrative Orthology	positive regulation of flower development	AT4G20370
GO:0010229	ISO	PLAZA Integrative Orthology	inflorescence development	OS06G06300 OS06G06320
GO:0048573	ISO	PLAZA Integrative Orthology	photoperiodism, flowering	OS06G06300
GO:0009909	ISO	PLAZA Integrative Orthology	regulation of flower development	OS06G06300 OS06G06320
GO:0048510	ISO	PLAZA Integrative Orthology	regulation of timing of transition from vegetative to reproductive phase	OS06G06300 OS06G06320
GO:0048572	ISO	PLAZA Integrative Orthology	short-day photoperiodism	OS06G06320
GO:0009648	ISO	PLAZA Integrative Orthology	photoperiodism	OS06G06320
GO:0048575	ISO	PLAZA Integrative Orthology	short-day photoperiodism, flowering	OS06G06320
GO:2000026	IEA	PLAZA Homology	regulation of multicellular organismal development	HOM03M000266
GO:0048580	IEA	PLAZA Homology	regulation of post-embryonic development	HOM03M000266
GO:0010228	IEA	PLAZA Homology	vegetative to reproductive phase transition of meristem	HOM03M000266

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003700	ISO	PLAZA Integrative Orthology	sequence-specific DNA binding transcription factor activity	OS06G06320
GO:0008429	IEA	PLAZA Homology	phosphatidylethanolamine binding	HOM03M000266

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR008914	Phosphatidylethanolamine-binding protein PEBP
IPR001858	Phosphatidylethanolamine-binding, conserved site

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.