Gene: SB04G005620 (Sorghum bicolor)

Overview top

Gene Identifier
SB04G005620
Transcript Identifier
SB04G005620.1
Gene Type
Coding gene
Location
chr_4 : 5522034-5525801 : positive

Family

Gene family
HOM03M000310
(181 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Homeobox protein knotted-1-like
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid5037680
tid5037680

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009416ISOPLAZA Integrative Orthologyresponse to light stimulusAT5G25220 AT5G11060
GO:0071345ISOPLAZA Integrative Orthologycellular response to cytokine stimulusAT5G25220
GO:0009722ISOPLAZA Integrative Orthologydetection of cytokinin stimulusAT5G25220
GO:0071369ISOPLAZA Integrative Orthologycellular response to ethylene stimulusAT4G32040
GO:0009727ISOPLAZA Integrative Orthologydetection of ethylene stimulusAT4G32040
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT1G62990
GO:2000652ISOPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT1G62990
GO:0010089ISOPLAZA Integrative Orthologyxylem developmentAT1G62990
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000310

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043565IEAInterProsequence-specific DNA binding
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0003677IEAInterProDNA binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G25220 AT4G32040

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G25220 AT5G11060

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005539ELK
IPR009057Homeodomain-like
IPR005540KNOX1
IPR001356Homeobox domain
IPR008422Homeobox KN domain
IPR005541KNOX2

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.