Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene: SB02G003170 (Sorghum bicolor)
Overview 
- Gene Identifier
- SB02G003170
- Transcript Identifier
- SB02G003170.1
- Gene Type
- Coding gene
- Location
- chr_2 : 3484771-3485409 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Tandem duplicate and Block duplicate
Descriptions
- Description (AnnoMine)
-
Zinc finger protein
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| pid | 5032573 |
| tid | 5032573 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0048579 | ISO | PLAZA Integrative Orthology | negative regulation of long-day photoperiodism, flowering | AT5G48890 |
| GO:0042752 | ISO | PLAZA Integrative Orthology | regulation of circadian rhythm | AT5G48890 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-dependent | AT5G48890 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0043169 | IEA | PLAZA Homology | cation binding | HOM03M000137 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G48890 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.