Gene: SB01G042400 (Sorghum bicolor)

Overview top

Gene Identifier
SB01G042400
Transcript Identifier
SB01G042400.1
Gene Type
Coding gene
Location
chr_1 : 65657300-65661709 : negative

Family

Gene family
HOM03M000170
(282 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Putative two-component response regulator-like APRR4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid5049894
tid5049894

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0000160IEAInterProphosphorelay signal transduction system
GO:0080113ISOPLAZA Integrative Orthologyregulation of seed growthAT4G16110 AT3G16857
GO:0071368ISOPLAZA Integrative Orthologycellular response to cytokinin stimulusAT4G16110 AT3G16857
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT4G16110 AT3G16857
GO:0010082ISOPLAZA Integrative Orthologyregulation of root meristem growthAT4G16110 AT3G16857
GO:0010119ISOPLAZA Integrative Orthologyregulation of stomatal movementAT4G16110
GO:0009873ISOPLAZA Integrative Orthologyethylene mediated signaling pathwayAT4G16110
GO:0010150ISOPLAZA Integrative Orthologyleaf senescenceAT4G16110
GO:0009735ISOPLAZA Integrative Orthologyresponse to cytokininAT4G16110 AT3G16857
GO:0009723ISOPLAZA Integrative Orthologyresponse to ethyleneAT4G16110
GO:0009736ISOPLAZA Integrative Orthologycytokinin-activated signaling pathwayAT4G16110 AT3G16857 AT2G01760
GO:0080022ISOPLAZA Integrative Orthologyprimary root developmentAT3G16857
GO:0048367ISOPLAZA Integrative Orthologyshoot system developmentAT3G16857
GO:0031537ISOPLAZA Integrative Orthologyregulation of anthocyanin metabolic processAT3G16857
GO:0010380ISOPLAZA Integrative Orthologyregulation of chlorophyll biosynthetic processAT3G16857
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003682IEAInterProchromatin binding
GO:0000156IEAInterProphosphorelay response regulator activity
GO:0003677IEAInterProDNA binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G16110 AT3G16857 AT2G01760
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT4G16110 AT3G16857
GO:0042802ISOPLAZA Integrative Orthologyidentical protein bindingAT2G01760
GO:0060089IEAPLAZA Homologymolecular transducer activityHOM03M000170
GO:0004871IEAPLAZA Homologysignal transducer activityHOM03M000170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT4G16110 AT3G16857

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR001789Signal transduction response regulator, receiver domain
IPR011006CheY-like superfamily
IPR006447Myb domain, plants
IPR017930Myb domain
IPR009057Homeodomain-like

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBARR-B