Gene: SB01G039220 (Sorghum bicolor)

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Gene Identifier
SB01G039220
Transcript Identifier
SB01G039220.1
Gene Type
Coding gene
Location
chr_1 : 62670128-62672235 : negative

Family

Gene family
HOM03M000933
(76 genes in 16 species)
specific family
Subfamily
ORTHO03M000315
(17 genes in 12 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Probable rhamnose biosynthetic enzyme 3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid5049689
tid5049689

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0044237IEAInterProcellular metabolic process
GO:0045226IEAInterProextracellular polysaccharide biosynthetic process
GO:0010253ISOPLAZA Integrative OrthologyUDP-rhamnose biosynthetic processAT1G53500
GO:0010214ISOPLAZA Integrative Orthologyseed coat developmentAT1G53500
GO:0010192ISOPLAZA Integrative Orthologymucilage biosynthetic processAT1G53500
GO:0046379IEAPLAZA Homologyextracellular polysaccharide metabolic processHOM03M000933

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0050662IEAInterProcoenzyme binding
GO:0008831IEAInterProdTDP-4-dehydrorhamnose reductase activity
GO:0003824IEAInterProcatalytic activity
GO:0050377ISOPLAZA Integrative OrthologyUDP-glucose 4,6-dehydratase activityAT1G53500
GO:0010490ISOPLAZA Integrative OrthologyUDP-4-keto-rhamnose-4-keto-reductase activityAT1G53500
GO:0010489ISOPLAZA Integrative OrthologyUDP-4-keto-6-deoxy-glucose-3,5-epimerase activityAT1G53500
GO:0010280ISOPLAZA Integrative OrthologyUDP-L-rhamnose synthase activityAT1G53500

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G53500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016040NAD(P)-binding domain
IPR001509NAD-dependent epimerase/dehydratase
IPR005913dTDP-4-dehydrorhamnose reductase

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.