Gene: SB01G037910 (Sorghum bicolor)

Overview top

Gene Identifier
SB01G037910
Transcript Identifier
SB01G037910.1
Gene Type
Coding gene
Location
chr_1 : 61455094-61473366 : negative

Family

Gene family
HOM03M003492
(26 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Calpain-type cysteine protease DEK1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid5049592
tid5049592

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508IEAInterProproteolysis
GO:0009934ISOPLAZA Integrative Orthologyregulation of meristem structural organizationOS02G47970 AT1G55350
GO:2000024ISOPLAZA Integrative Orthologyregulation of leaf developmentOS02G47970 AT1G55350
GO:2000011ISOPLAZA Integrative Orthologyregulation of adaxial/abaxial pattern formationOS02G47970
GO:0090392ISOPLAZA Integrative Orthologysepal giant cell differentiationAT1G55350
GO:0097264ISOPLAZA Integrative Orthologyself proteolysisAT1G55350
GO:2000014ISOPLAZA Integrative Orthologyregulation of endosperm developmentAT1G55350
GO:0042127ISOPLAZA Integrative Orthologyregulation of cell proliferationAT1G55350
GO:0001558ISOPLAZA Integrative Orthologyregulation of cell growthAT1G55350
GO:0032877ISOPLAZA Integrative Orthologypositive regulation of DNA endoreduplicationAT1G55350
GO:0009957ISOPLAZA Integrative Orthologyepidermal cell fate specificationAT1G55350
GO:0040014ISOPLAZA Integrative Orthologyregulation of multicellular organism growthAT1G55350
GO:0009960ISOPLAZA Integrative Orthologyendosperm developmentAT1G55350
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G55350
GO:0001708ISOPLAZA Integrative Orthologycell fate specificationAT1G55350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004198IEAInterProcalcium-dependent cysteine-type endopeptidase activity
GO:0008234ISOPLAZA Integrative Orthologycysteine-type peptidase activityAT1G55350
GO:0004197ISOPLAZA Integrative Orthologycysteine-type endopeptidase activityAT1G55350

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0005887ISOPLAZA Integrative Orthologyintegral to plasma membraneAT1G55350
GO:0010008ISOPLAZA Integrative Orthologyendosome membraneAT1G55350
GO:0005789ISOPLAZA Integrative Orthologyendoplasmic reticulum membraneAT1G55350
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT1G55350
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT1G55350
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G55350

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001300Peptidase C2, calpain, catalytic domain
IPR022682Peptidase C2, calpain, large subunit, domain III
IPR013320Concanavalin A-like lectin/glucanase, subgroup
IPR000169Cysteine peptidase, cysteine active site
IPR022683Peptidase C2, calpain, domain III
IPR008985Concanavalin A-like lectin/glucanases superfamily

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.