Gene: SB01G028230 (Sorghum bicolor)

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Gene Identifier
SB01G028230
Transcript Identifier
SB01G028230.1
Gene Type
Coding gene
Location
chr_1 : 49234953-49237082 : negative

Family

Gene family
HOM03M000211
(233 genes in 14 species)
specific family
Subfamily
ORTHO03M002693
(8 genes in 4 species)
specific family

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Descriptions

Description (AnnoMine)
Transcription factor ABA-INDUCIBLE bHLH-TYPE
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid5049010
tid5049010

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042538ISOPLAZA Integrative Orthologyhyperosmotic salinity responseAT5G46830
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G46830
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT5G46830 AT5G46760 AT4G17880
GO:0006952ISOPLAZA Integrative Orthologydefense responseAT5G46760 AT4G17880
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT5G46760 AT4G17880 AT1G32640
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT5G46760 AT1G32640
GO:0009718ISOPLAZA Integrative Orthologyanthocyanin-containing compound biosynthetic processAT5G46760 AT4G17880
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT1G32640
GO:0009269ISOPLAZA Integrative Orthologyresponse to desiccationAT1G32640
GO:0010200ISOPLAZA Integrative Orthologyresponse to chitinAT1G32640
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingAT1G32640
GO:2000068ISOPLAZA Integrative Orthologyregulation of defense response to insectAT1G32640
GO:0051090ISOPLAZA Integrative Orthologyregulation of sequence-specific DNA binding transcription factor activityAT1G32640
GO:0043619ISOPLAZA Integrative Orthologyregulation of transcription from RNA polymerase II promoter in response to oxidative stressAT1G32640
GO:0009963ISOPLAZA Integrative Orthologypositive regulation of flavonoid biosynthetic processAT1G32640
GO:0009867ISOPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT1G32640

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0005509ISOPLAZA Integrative Orthologycalcium ion bindingAT5G46830
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT5G46830
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT5G46830 AT1G32640
GO:0043425ISOPLAZA Integrative OrthologybHLH transcription factor bindingAT5G46760 AT4G17880
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G46760 AT1G32640

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusOS10G42430 AT5G46830 AT5G46760 AT4G17880 AT1G32640

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
IPR025610Transcription factor MYC/MYB N-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBbHLH