PLAZA 3.0 Monocots gene overview : SB01G005200

Gene: SB01G005200 (Sorghum bicolor)

Overview

Gene Identifier: SB01G005200
Transcript Identifier: SB01G005200.1
Gene Type: Coding gene
Location: chr_1 : 4319915-4325084 : negative

Family

Gene family: HOM03M000257
(206 genes in 16 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Plastidial pyruvate kinase 1, chloroplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	5047958
tid	5047958

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006096	IEA	InterPro	glycolysis
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT3G22960
GO:0010431	ISO	PLAZA Integrative Orthology	seed maturation	AT3G22960
GO:0006629	ISO	PLAZA Integrative Orthology	lipid metabolic process	AT3G22960
GO:1901575	IEA	PLAZA Homology	organic substance catabolic process	HOM03M000257
GO:0006091	IEA	PLAZA Homology	generation of precursor metabolites and energy	HOM03M000257
GO:0016052	IEA	PLAZA Homology	carbohydrate catabolic process	HOM03M000257
GO:0044712	IEA	PLAZA Homology	single-organism catabolic process	HOM03M000257
GO:0006007	IEA	PLAZA Homology	glucose catabolic process	HOM03M000257
GO:0006006	IEA	PLAZA Homology	glucose metabolic process	HOM03M000257
GO:0005996	IEA	PLAZA Homology	monosaccharide metabolic process	HOM03M000257
GO:0046365	IEA	PLAZA Homology	monosaccharide catabolic process	HOM03M000257
GO:0005975	IEA	PLAZA Homology	carbohydrate metabolic process	HOM03M000257
GO:0009056	IEA	PLAZA Homology	catabolic process	HOM03M000257
GO:0019318	IEA	PLAZA Homology	hexose metabolic process	HOM03M000257
GO:0044723	IEA	PLAZA Homology	single-organism carbohydrate metabolic process	HOM03M000257
GO:0044724	IEA	PLAZA Homology	single-organism carbohydrate catabolic process	HOM03M000257
GO:0019320	IEA	PLAZA Homology	hexose catabolic process	HOM03M000257

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0000287	IEA	InterPro	magnesium ion binding
GO:0030955	IEA	InterPro	potassium ion binding
GO:0003824	IEA	InterPro	catalytic activity
GO:0004743	IEA	InterPro	pyruvate kinase activity
GO:0031420	IEA	PLAZA Homology	alkali metal ion binding	HOM03M000257

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT3G22960
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT3G22960

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001697	Pyruvate kinase
IPR018209	Pyruvate kinase, active site
IPR015794	Pyruvate kinase, alpha/beta
IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR011037	Pyruvate kinase-like, insert domain
IPR015793	Pyruvate kinase, barrel
IPR015795	Pyruvate kinase, C-terminal
IPR006660	Arsenate reductase-like
IPR015806	Pyruvate kinase, beta-barrel insert domain

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.