Gene: SB00G00170 (Sorghum bicolor)

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Gene Identifier
SB00G00170
Transcript Identifier
SB00G00170.1
Gene Type
Coding gene
Location
scaffold_10 : 5710754-5712128 : negative

Family

Gene family
HOM03M000679
(102 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
sigma factor RpoD
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid5047184
tid5047184

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006352IEAInterProDNA-dependent transcription, initiation
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000679

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016987IEAInterProsigma factor activity
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0003677IEAInterProDNA binding
GO:0000990IEAPLAZA Homologycore RNA polymerase binding transcription factor activityHOM03M000679
GO:0000996IEAPLAZA Homologycore DNA-dependent RNA polymerase binding promoter specificity activityHOM03M000679

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536ISOPLAZA Integrative OrthologyplastidOS11G26160

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR000943RNA polymerase sigma-70
IPR007630RNA polymerase sigma-70 region 4
IPR013325RNA polymerase sigma factor, region 2
IPR013324RNA polymerase sigma factor, region 3/4
IPR007627RNA polymerase sigma-70 region 2
IPR014284RNA polymerase sigma-70 like domain
IPR007624RNA polymerase sigma-70 region 3

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSigma70-like