Gene: PT18G14590 (Populus trichocarpa)

Overview top

Gene Identifier
PT18G14590
Transcript Identifier
PT18G14590.1
Gene Type
Coding gene
Location
Chr18 : 16543093-16545751 : negative

Family

Gene family
HOM03M003229
(27 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
beta type-6-A like protein
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.018G145900.1
idPAC:27009726

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0051603IEAGenome Projectproteolysis involved in cellular protein catabolic process
GO:0010043ISOPLAZA Integrative Orthologyresponse to zinc ionAT4G31300
GO:0010363ISOPLAZA Integrative Orthologyregulation of plant-type hypersensitive responseAT4G31300
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT4G31300
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT4G31300

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004298IEAGenome Projectthreonine-type endopeptidase activity
GO:0004175IEAInterProendopeptidase activity
GO:0008233ISOPLAZA Integrative Orthologypeptidase activityAT4G31300
GO:0070003IEAPLAZA Homologythreonine-type peptidase activityHOM03M003229

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005839IEAGenome Projectproteasome core complex
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G31300
GO:0000502ISOPLAZA Integrative Orthologyproteasome complexAT4G31300
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT4G31300
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT4G31300

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016050Proteasome beta-type subunit, conserved site
IPR000243Peptidase T1A, proteasome beta-subunit
IPR023333Proteasome B-type subunit
IPR001353Proteasome, subunit alpha/beta

Mapman id Description
29.5.11.20protein.degradation.ubiquitin.proteasom
No SignalP domains detected for this gene.