Gene: PT18G11130 (Populus trichocarpa)

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Gene Identifier
PT18G11130
Transcript Identifier
PT18G11130.1
Gene Type
Coding gene
Location
Chr18 : 13713504-13717729 : negative

Family

Gene family
HOM03M000170
(282 genes in 16 species)
specific family
Subfamily
ORTHO03M010621
(4 genes in 3 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Putative two-component response regulator-like APRR4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.018G111300.1
idPAC:27008864

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000160IEAGenome Projectphosphorelay signal transduction system
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0009736ISOPLAZA Integrative Orthologycytokinin-activated signaling pathwayAT5G58080 AT4G31920
GO:0080113ISOPLAZA Integrative Orthologyregulation of seed growthAT4G31920
GO:0071368ISOPLAZA Integrative Orthologycellular response to cytokinin stimulusAT4G31920
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT4G31920
GO:0010082ISOPLAZA Integrative Orthologyregulation of root meristem growthAT4G31920
GO:0080022ISOPLAZA Integrative Orthologyprimary root developmentAT4G31920
GO:0048367ISOPLAZA Integrative Orthologyshoot system developmentAT4G31920
GO:0031537ISOPLAZA Integrative Orthologyregulation of anthocyanin metabolic processAT4G31920
GO:0010380ISOPLAZA Integrative Orthologyregulation of chlorophyll biosynthetic processAT4G31920
GO:0009735ISOPLAZA Integrative Orthologyresponse to cytokininAT4G31920
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000156IEAGenome Projectphosphorelay response regulator activity
GO:0003677IEAGenome ProjectDNA binding
GO:0003682IEAInterProchromatin binding
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT4G31920
GO:0060089IEAPLAZA Homologymolecular transducer activityHOM03M000170
GO:0004871IEAPLAZA Homologysignal transducer activityHOM03M000170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT4G31920

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011006CheY-like superfamily
IPR009057Homeodomain-like
IPR006447Myb domain, plants
IPR001789Signal transduction response regulator, receiver domain
IPR001005SANT/Myb domain
IPR017930Myb domain

Mapman id Description
27.3.5RNA.regulation of transcription.ARR
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBARR-B
PlantTFDBARR-B