Gene: PT17G12450 (Populus trichocarpa)

Overview top

Gene Identifier
PT17G12450
Transcript Identifier
PT17G12450.1
Gene Type
Coding gene
Location
Chr17 : 13656426-13669431 : negative

Family

Gene family
HOM03M001163
(63 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Valine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.017G124500.1
idPAC:26984465

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006438IEAGenome Projectvalyl-tRNA aminoacylation
GO:0006412IEAGenome Projecttranslation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004832IEAGenome Projectvaline-tRNA ligase activity
GO:0002161IEAInterProaminoacyl-tRNA editing activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR002303Valine-tRNA ligase
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR019499Valyl-tRNA synthetase, tRNA-binding arm
IPR002300Aminoacyl-tRNA synthetase, class Ia
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site
IPR013155Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
IPR010978tRNA-binding arm

Mapman id Description
29.1.9protein.aa activation.valine-tRNA ligase
No SignalP domains detected for this gene.