Gene: PT16G12090 (Populus trichocarpa)

Overview top

Gene Identifier
PT16G12090
Transcript Identifier
PT16G12090.1
Gene Type
Coding gene
Location
Chr16 : 12568633-12573659 : positive

Family

Gene family
HOM03M004889
(20 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Diaminopimelate epimerase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.016G120900.1
idPAC:27012636

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009089IEAGenome Projectlysine biosynthetic process via diaminopimelate
GO:0009085IEAPLAZA Homologylysine biosynthetic processHOM03M004889
GO:0046451IEAPLAZA Homologydiaminopimelate metabolic processHOM03M004889

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008837IEAGenome Projectdiaminopimelate epimerase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G53580
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G53580

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001653Diaminopimelate epimerase, DapF
IPR018510Diaminopimelate epimerase, active site

Mapman id Description
13.1.3.5.4amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate epimerase
No SignalP domains detected for this gene.