Gene: PT16G05030 (Populus trichocarpa)
Overview 
- Gene Identifier
- PT16G05030
- Transcript Identifier
- PT16G05030.1
- Gene Type
- Coding gene
- Location
- Chr16 : 3201252-3203071 : negative
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
No default description found ...Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
pid | Potri.016G050300.1 |
id | PAC:27013286 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:1900426 | ISO | PLAZA Integrative Orthology | positive regulation of defense response to bacterium | AT2G42260 AT3G57860 |
GO:0060564 | ISO | PLAZA Integrative Orthology | negative regulation of mitotic anaphase-promoting complex activity | AT2G42260 AT3G57860 |
GO:0009561 | ISO | PLAZA Integrative Orthology | megagametogenesis | AT2G42260 AT3G57860 |
GO:0009960 | ISO | PLAZA Integrative Orthology | endosperm development | AT2G42260 AT3G57860 |
GO:0010224 | ISO | PLAZA Integrative Orthology | response to UV-B | AT2G42260 |
GO:0042023 | ISO | PLAZA Integrative Orthology | DNA endoreduplication | AT2G42260 |
GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT2G42260 |
GO:0007135 | ISO | PLAZA Integrative Orthology | meiosis II | AT3G57860 |
GO:0007127 | ISO | PLAZA Integrative Orthology | meiosis I | AT3G57860 |
GO:0007113 | ISO | PLAZA Integrative Orthology | endomitotic cell cycle | AT3G57860 |
GO:0007088 | ISO | PLAZA Integrative Orthology | regulation of mitosis | AT3G57860 |
GO:0040020 | ISO | PLAZA Integrative Orthology | regulation of meiosis | AT3G57860 |
GO:0044786 | IEA | PLAZA Homology | cell cycle DNA replication | HOM03M008731 |
GO:0031397 | IEA | PLAZA Homology | negative regulation of protein ubiquitination | HOM03M008731 |
GO:0045861 | IEA | PLAZA Homology | negative regulation of proteolysis | HOM03M008731 |
GO:0051444 | IEA | PLAZA Homology | negative regulation of ubiquitin-protein ligase activity | HOM03M008731 |
GO:0032435 | IEA | PLAZA Homology | negative regulation of proteasomal ubiquitin-dependent protein catabolic process | HOM03M008731 |
GO:0051352 | IEA | PLAZA Homology | negative regulation of ligase activity | HOM03M008731 |
GO:0051340 | IEA | PLAZA Homology | regulation of ligase activity | HOM03M008731 |
GO:0051438 | IEA | PLAZA Homology | regulation of ubiquitin-protein ligase activity | HOM03M008731 |
GO:0051436 | IEA | PLAZA Homology | negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | HOM03M008731 |
GO:0051439 | IEA | PLAZA Homology | regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | HOM03M008731 |
GO:1901799 | IEA | PLAZA Homology | negative regulation of proteasomal protein catabolic process | HOM03M008731 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G42260 AT3G57860 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G42260 AT3G57860 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
No InterPro domains detected for this gene.
Mapman id | Description |
---|---|
31.3 | cell.cycle |
No SignalP domains detected for this gene.