Gene: PT15G11040 (Populus trichocarpa)

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Gene Identifier
PT15G11040
Transcript Identifier
PT15G11040.1
Gene Type
Coding gene
Location
Chr15 : 12681699-12683631 : negative

Family

Gene family
HOM03M001026
(71 genes in 16 species)
specific family
Subfamily
ORTHO03M000807
(12 genes in 11 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
dismutase [Fe] 2, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.015G110400.2
idPAC:27017158

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006801IEAGenome Projectsuperoxide metabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0009411ISOPLAZA Integrative Orthologyresponse to UVAT5G51100
GO:0010193ISOPLAZA Integrative Orthologyresponse to ozoneAT4G25100
GO:0009642ISOPLAZA Integrative Orthologyresponse to light intensityAT4G25100
GO:0007623ISOPLAZA Integrative Orthologycircadian rhythmAT4G25100
GO:0019430ISOPLAZA Integrative Orthologyremoval of superoxide radicalsAT4G25100
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G25100
GO:0046688ISOPLAZA Integrative Orthologyresponse to copper ionAT4G25100
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT4G25100

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004784IEAGenome Projectsuperoxide dismutase activity
GO:0046872IEAGenome Projectmetal ion binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G51100 AT4G25100
GO:0005507ISOPLAZA Integrative Orthologycopper ion bindingAT4G25100
GO:0016721IEAPLAZA Homologyoxidoreductase activity, acting on superoxide radicals as acceptorHOM03M001026

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0042644ISOPLAZA Integrative Orthologychloroplast nucleoidAT5G51100
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT5G51100 AT4G25100
GO:0009295ISOPLAZA Integrative OrthologynucleoidAT5G51100
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G51100 AT4G25100
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT4G25100
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT4G25100
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G25100
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT4G25100
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT4G25100

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019831Manganese/iron superoxide dismutase, N-terminal
IPR001189Manganese/iron superoxide dismutase
IPR019832Manganese/iron superoxide dismutase, C-terminal
IPR019833Manganese/iron superoxide dismutase, binding site

Mapman id Description
21.6redox.dismutases and catalases
No SignalP domains detected for this gene.