Gene: PT15G09740 (Populus trichocarpa)

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Gene Identifier
PT15G09740
Transcript Identifier
PT15G09740.1
Gene Type
Coding gene
Location
Chr15 : 11729711-11734240 : negative

Family

Gene family
HOM03M000450
(140 genes in 16 species)
specific family
Subfamily
ORTHO03M001308
(10 genes in 7 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
transcription factor Y subunit C-4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.015G097400.1
idPAC:27017494

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT3G48590
GO:0009738ISOPLAZA Integrative Orthologyabscisic acid-activated signaling pathwayAT5G63470
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000450

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0046982IEAInterProprotein heterodimerization activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT3G48590

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0016602IEAInterProCCAAT-binding factor complex
GO:0005634ISOPLAZA Integrative OrthologynucleusAT3G48590 AT5G63470
GO:0005667IEAPLAZA Homologytranscription factor complexHOM03M000450
GO:0044798IEAPLAZA Homologynuclear transcription factor complexHOM03M000450

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009072Histone-fold
IPR003958Transcription factor CBF/NF-Y/archaeal histone
IPR027170Transcriptional activator NFYC/HAP5 subunit

Mapman id Description
27.3.16RNA.regulation of transcription.CCAAT box binding factor family, HAP5
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBCCAAT
PlantTFDBNF-YC