PLAZA 3.0 Monocots gene overview : PT13G13790

Gene: PT13G13790 (Populus trichocarpa)

Overview

Gene Identifier: PT13G13790
Transcript Identifier: PT13G13790.1
Gene Type: Coding gene
Location: Chr13 : 14719426-14719914 : positive

Family

Gene family: HOM03M003142
(28 genes in 13 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): synthase subunit b, chloroplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Potri.013G137900.1
id	PAC:26995233

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0015986	IEA	Genome Project	ATP synthesis coupled proton transport
GO:0015985	IEA	PLAZA Homology	energy coupled proton transport, down electrochemical gradient	HOM03M003142

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0015078	IEA	Genome Project	hydrogen ion transmembrane transporter activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0045263	IEA	Genome Project	proton-transporting ATP synthase complex, coupling factor F(o)

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002146	ATPase, F0 complex, subunit B/B', bacterial/chloroplast

Mapman id	Description
1.1.4.8	PS.lightreaction.ATP synthase.subunit B (ATPF)

No SignalP domains detected for this gene.