Gene: PT13G09260 (Populus trichocarpa)

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Gene Identifier
PT13G09260
Transcript Identifier
PT13G09260.1
Gene Type
Coding gene
Location
Chr13 : 9859426-9862394 : negative

Family

Gene family
HOM03M001026
(71 genes in 16 species)
specific family
Subfamily
ORTHO03M005017
(7 genes in 7 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
3.2, mitochondrial
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.013G092600.1
idPAC:26995979

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006801IEAGenome Projectsuperoxide metabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT3G10920
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT3G10920
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT3G10920
GO:0010043ISOPLAZA Integrative Orthologyresponse to zinc ionAT3G10920
GO:0019430ISOPLAZA Integrative Orthologyremoval of superoxide radicalsAT3G10920

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004784IEAGenome Projectsuperoxide dismutase activity
GO:0046872IEAGenome Projectmetal ion binding
GO:0005507ISOPLAZA Integrative Orthologycopper ion bindingAT3G10920
GO:0016721IEAPLAZA Homologyoxidoreductase activity, acting on superoxide radicals as acceptorHOM03M001026

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT3G10920

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001189Manganese/iron superoxide dismutase
IPR019831Manganese/iron superoxide dismutase, N-terminal
IPR019832Manganese/iron superoxide dismutase, C-terminal
IPR019833Manganese/iron superoxide dismutase, binding site

Mapman id Description
21.6redox.dismutases and catalases
No SignalP domains detected for this gene.