Gene: PT12G05810 (Populus trichocarpa)

Overview top

Gene Identifier
PT12G05810
Transcript Identifier
PT12G05810.1
Gene Type
Coding gene
Location
Chr12 : 6033953-6041518 : negative

Family

Gene family
HOM03M006026
(17 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
patch domain-containing protein 1 homolog
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.012G058100.1
idPAC:27050770

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006396IEAGenome ProjectRNA processing
GO:0035196ISOPLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNAAT5G23080
GO:0030422ISOPLAZA Integrative Orthologyproduction of siRNA involved in RNA interferenceAT5G23080
GO:0010087ISOPLAZA Integrative Orthologyphloem or xylem histogenesisAT5G23080
GO:0009926ISOPLAZA Integrative Orthologyauxin polar transportAT5G23080
GO:0009734ISOPLAZA Integrative Orthologyauxin mediated signaling pathwayAT5G23080

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEAGenome ProjectRNA binding
GO:0070883ISOPLAZA Integrative Orthologypre-miRNA bindingAT5G23080
GO:0070878ISOPLAZA Integrative Orthologyprimary miRNA bindingAT5G23080
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G23080

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G23080

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000061SWAP/Surp
IPR011666Domain of unknown function DUF1604

Mapman id Description
27.1RNA.processing
No SignalP domains detected for this gene.