Gene: PT11G09270 (Populus trichocarpa)

Overview top

Gene Identifier
PT11G09270
Transcript Identifier
PT11G09270.1
Gene Type
Coding gene
Location
Chr11 : 11235848-11241893 : negative

Family

Gene family
HOM03M003833
(24 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
DNA topoisomerase I, mitochondrial
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.011G092700.1
idPAC:27000684

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006265IEAGenome ProjectDNA topological change

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003918IEAGenome ProjectDNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0003917IEAGenome ProjectDNA topoisomerase type I activity
GO:0061505IEAPLAZA HomologyDNA topoisomerase II activityHOM03M003833

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005694IEAGenome Projectchromosome

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013499DNA topoisomerase I, eukaryotic-type
IPR001631DNA topoisomerase I
IPR014711DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type
IPR013500DNA topoisomerase I, catalytic core, eukaryotic-type
IPR008336DNA topoisomerase I, DNA binding, eukaryotic-type
IPR014727DNA topoisomerase I, catalytic core, alpha/beta subdomain
IPR018521DNA topoisomerase I, active site
IPR013034DNA topoisomerase I, domain 1
IPR011010DNA breaking-rejoining enzyme, catalytic core
IPR013030DNA topoisomerase I, DNA binding, mixed alpha/beta motif, eukaryotic-type
IPR025834Topoisomerase I C-terminal domain

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.