Gene: PT11G06130 (Populus trichocarpa)

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Gene Identifier
PT11G06130
Transcript Identifier
PT11G06130.1
Gene Type
Coding gene
Location
Chr11 : 5460730-5462282 : negative

Family

Gene family
HOM03M000036
(959 genes in 16 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Ras-related protein Rab
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.011G061300.1
idPAC:27002318

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007264IEAGenome Projectsmall GTPase mediated signal transduction
GO:0006184IEAInterProGTP catabolic process
GO:0007165IEAInterProsignal transduction
GO:0015031IEAInterProprotein transport
GO:0006886IEAInterProintracellular protein transport
GO:0006913IEAInterPronucleocytoplasmic transport
GO:0009203IEAPLAZA Homologyribonucleoside triphosphate catabolic processHOM03M000036
GO:0009205IEAPLAZA Homologypurine ribonucleoside triphosphate metabolic processHOM03M000036
GO:0009207IEAPLAZA Homologypurine ribonucleoside triphosphate catabolic processHOM03M000036
GO:0046128IEAPLAZA Homologypurine ribonucleoside metabolic processHOM03M000036
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000036
GO:0006753IEAPLAZA Homologynucleoside phosphate metabolic processHOM03M000036
GO:0046130IEAPLAZA Homologypurine ribonucleoside catabolic processHOM03M000036
GO:0006152IEAPLAZA Homologypurine nucleoside catabolic processHOM03M000036
GO:0042454IEAPLAZA Homologyribonucleoside catabolic processHOM03M000036
GO:0051169IEAPLAZA Homologynuclear transportHOM03M000036
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000036
GO:0033036IEAPLAZA Homologymacromolecule localizationHOM03M000036
GO:0019439IEAPLAZA Homologyaromatic compound catabolic processHOM03M000036
GO:0046700IEAPLAZA Homologyheterocycle catabolic processHOM03M000036
GO:0009987IEAPLAZA Homologycellular processHOM03M000036
GO:0023052IEAPLAZA HomologysignalingHOM03M000036
GO:1901292IEAPLAZA Homologynucleoside phosphate catabolic processHOM03M000036
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000036
GO:0019637IEAPLAZA Homologyorganophosphate metabolic processHOM03M000036
GO:0051179IEAPLAZA HomologylocalizationHOM03M000036
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03M000036
GO:0019693IEAPLAZA Homologyribose phosphate metabolic processHOM03M000036
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03M000036
GO:1901069IEAPLAZA Homologyguanosine-containing compound catabolic processHOM03M000036
GO:1901068IEAPLAZA Homologyguanosine-containing compound metabolic processHOM03M000036
GO:0044281IEAPLAZA Homologysmall molecule metabolic processHOM03M000036
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03M000036
GO:0009261IEAPLAZA Homologyribonucleotide catabolic processHOM03M000036
GO:0042278IEAPLAZA Homologypurine nucleoside metabolic processHOM03M000036
GO:1901565IEAPLAZA Homologyorganonitrogen compound catabolic processHOM03M000036
GO:1901564IEAPLAZA Homologyorganonitrogen compound metabolic processHOM03M000036
GO:0070727IEAPLAZA Homologycellular macromolecule localizationHOM03M000036
GO:0009199IEAPLAZA Homologyribonucleoside triphosphate metabolic processHOM03M000036
GO:0009056IEAPLAZA Homologycatabolic processHOM03M000036
GO:0055086IEAPLAZA Homologynucleobase-containing small molecule metabolic processHOM03M000036
GO:0046907IEAPLAZA Homologyintracellular transportHOM03M000036
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000036
GO:1901361IEAPLAZA Homologyorganic cyclic compound catabolic processHOM03M000036
GO:0034655IEAPLAZA Homologynucleobase-containing compound catabolic processHOM03M000036
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000036
GO:0072521IEAPLAZA Homologypurine-containing compound metabolic processHOM03M000036
GO:0008152IEAPLAZA Homologymetabolic processHOM03M000036
GO:0072523IEAPLAZA Homologypurine-containing compound catabolic processHOM03M000036
GO:0009116IEAPLAZA Homologynucleoside metabolic processHOM03M000036
GO:0044700IEAPLAZA Homologysingle organism signalingHOM03M000036
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03M000036
GO:0009119IEAPLAZA Homologyribonucleoside metabolic processHOM03M000036
GO:0071702IEAPLAZA Homologyorganic substance transportHOM03M000036
GO:0009259IEAPLAZA Homologyribonucleotide metabolic processHOM03M000036
GO:0006163IEAPLAZA Homologypurine nucleotide metabolic processHOM03M000036
GO:0009117IEAPLAZA Homologynucleotide metabolic processHOM03M000036
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000036
GO:0051716IEAPLAZA Homologycellular response to stimulusHOM03M000036
GO:0009146IEAPLAZA Homologypurine nucleoside triphosphate catabolic processHOM03M000036
GO:0009144IEAPLAZA Homologypurine nucleoside triphosphate metabolic processHOM03M000036
GO:0009143IEAPLAZA Homologynucleoside triphosphate catabolic processHOM03M000036
GO:0006796IEAPLAZA Homologyphosphate-containing compound metabolic processHOM03M000036
GO:0009141IEAPLAZA Homologynucleoside triphosphate metabolic processHOM03M000036
GO:0046434IEAPLAZA Homologyorganophosphate catabolic processHOM03M000036
GO:0006793IEAPLAZA Homologyphosphorus metabolic processHOM03M000036
GO:0051641IEAPLAZA Homologycellular localizationHOM03M000036
GO:0006195IEAPLAZA Homologypurine nucleotide catabolic processHOM03M000036
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03M000036
GO:0044712IEAPLAZA Homologysingle-organism catabolic processHOM03M000036
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000036
GO:0016482IEAPLAZA Homologycytoplasmic transportHOM03M000036
GO:0006810IEAPLAZA HomologytransportHOM03M000036
GO:0051649IEAPLAZA Homologyestablishment of localization in cellHOM03M000036
GO:0044270IEAPLAZA Homologycellular nitrogen compound catabolic processHOM03M000036
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000036
GO:1901657IEAPLAZA Homologyglycosyl compound metabolic processHOM03M000036
GO:1901658IEAPLAZA Homologyglycosyl compound catabolic processHOM03M000036
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000036
GO:0009166IEAPLAZA Homologynucleotide catabolic processHOM03M000036
GO:0045184IEAPLAZA Homologyestablishment of protein localizationHOM03M000036
GO:0009164IEAPLAZA Homologynucleoside catabolic processHOM03M000036
GO:0035556IEAPLAZA Homologyintracellular signal transductionHOM03M000036
GO:0008104IEAPLAZA Homologyprotein localizationHOM03M000036
GO:0007154IEAPLAZA Homologycell communicationHOM03M000036
GO:0046039IEAPLAZA HomologyGTP metabolic processHOM03M000036
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03M000036
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000036
GO:0044699IEAPLAZA Homologysingle-organism processHOM03M000036
GO:0009150IEAPLAZA Homologypurine ribonucleotide metabolic processHOM03M000036
GO:1901136IEAPLAZA Homologycarbohydrate derivative catabolic processHOM03M000036
GO:1901135IEAPLAZA Homologycarbohydrate derivative metabolic processHOM03M000036
GO:0009154IEAPLAZA Homologypurine ribonucleotide catabolic processHOM03M000036
GO:0034613IEAPLAZA Homologycellular protein localizationHOM03M000036
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03M000036
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03M000036

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924IEAGenome ProjectGTPase activity
GO:0005525IEAGenome ProjectGTP binding
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000036
GO:0043168IEAPLAZA Homologyanion bindingHOM03M000036
GO:0043167IEAPLAZA Homologyion bindingHOM03M000036
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000036
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000036
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03M000036
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03M000036
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000036
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000036
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M000036
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000036
GO:0019001IEAPLAZA Homologyguanyl nucleotide bindingHOM03M000036
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000036
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000036
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000036
GO:0032561IEAPLAZA Homologyguanyl ribonucleotide bindingHOM03M000036
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000036
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000036
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000036
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000036
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03M000036
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000036
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000036
GO:0005488IEAPLAZA HomologybindingHOM03M000036
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000036

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0016020IEAInterPromembrane
GO:0005623IEAPLAZA HomologycellHOM03M000036
GO:0044464IEAPLAZA Homologycell partHOM03M000036

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001806Small GTPase superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR002041Ran GTPase
IPR005225Small GTP-binding protein domain
IPR003579Small GTPase superfamily, Rab type
IPR024156Small GTPase superfamily, ARF type
IPR020849Small GTPase superfamily, Ras type
IPR003578Small GTPase superfamily, Rho type

Mapman id Description
30.5signalling.G-proteins
No SignalP domains detected for this gene.