Gene: PT10G25080 (Populus trichocarpa)
Overview 
- Gene Identifier
- PT10G25080
- Transcript Identifier
- PT10G25080.1
- Gene Type
- Coding gene
- Location
- Chr10 : 22298107-22311362 : negative
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description (AnnoMine)
-
Putative calcium-transporting ATPase 13, plasma membrane-type
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
pid | Potri.010G250800.1 |
id | PAC:26978539 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
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Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0008152 | IEA | Genome Project | metabolic process | |
GO:0006812 | IEA | Genome Project | cation transport | |
GO:0006754 | IEA | Genome Project | ATP biosynthetic process | |
GO:0070588 | IEA | InterPro | calcium ion transmembrane transport | |
GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT3G21180 |
GO:0007338 | ISO | PLAZA Integrative Orthology | single fertilization | AT3G21180 |
GO:0070838 | IEA | PLAZA Homology | divalent metal ion transport | HOM03M000149 |
GO:0044765 | IEA | PLAZA Homology | single-organism transport | HOM03M000149 |
GO:0006816 | IEA | PLAZA Homology | calcium ion transport | HOM03M000149 |
GO:0072511 | IEA | PLAZA Homology | divalent inorganic cation transport | HOM03M000149 |
GO:0006811 | IEA | PLAZA Homology | ion transport | HOM03M000149 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0000166 | IEA | Genome Project | nucleotide binding | |
GO:0046872 | IEA | Genome Project | metal ion binding | |
GO:0003824 | IEA | Genome Project | catalytic activity | |
GO:0005516 | IEA | Genome Project | calmodulin binding | |
GO:0015662 | IEA | Genome Project | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | |
GO:0019829 | IEA | InterPro | cation-transporting ATPase activity | |
GO:0005388 | IEA | InterPro | calcium-transporting ATPase activity | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0005215 | IEA | PLAZA Homology | transporter activity | HOM03M000149 |
GO:0016817 | IEA | PLAZA Homology | hydrolase activity, acting on acid anhydrides | HOM03M000149 |
GO:0015075 | IEA | PLAZA Homology | ion transmembrane transporter activity | HOM03M000149 |
GO:0008324 | IEA | PLAZA Homology | cation transmembrane transporter activity | HOM03M000149 |
GO:0016818 | IEA | PLAZA Homology | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | HOM03M000149 |
GO:0022891 | IEA | PLAZA Homology | substrate-specific transmembrane transporter activity | HOM03M000149 |
GO:0022892 | IEA | PLAZA Homology | substrate-specific transporter activity | HOM03M000149 |
GO:0016820 | IEA | PLAZA Homology | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | HOM03M000149 |
GO:0015399 | IEA | PLAZA Homology | primary active transmembrane transporter activity | HOM03M000149 |
GO:0015405 | IEA | PLAZA Homology | P-P-bond-hydrolysis-driven transmembrane transporter activity | HOM03M000149 |
GO:0072509 | IEA | PLAZA Homology | divalent inorganic cation transmembrane transporter activity | HOM03M000149 |
GO:0015085 | IEA | PLAZA Homology | calcium ion transmembrane transporter activity | HOM03M000149 |
GO:0046873 | IEA | PLAZA Homology | metal ion transmembrane transporter activity | HOM03M000149 |
GO:0043492 | IEA | PLAZA Homology | ATPase activity, coupled to movement of substances | HOM03M000149 |
GO:0042623 | IEA | PLAZA Homology | ATPase activity, coupled | HOM03M000149 |
GO:0042626 | IEA | PLAZA Homology | ATPase activity, coupled to transmembrane movement of substances | HOM03M000149 |
GO:0042625 | IEA | PLAZA Homology | ATPase activity, coupled to transmembrane movement of ions | HOM03M000149 |
GO:0022804 | IEA | PLAZA Homology | active transmembrane transporter activity | HOM03M000149 |
GO:1901265 | IEA | PLAZA Homology | nucleoside phosphate binding | HOM03M000149 |
GO:0016462 | IEA | PLAZA Homology | pyrophosphatase activity | HOM03M000149 |
GO:0016887 | IEA | PLAZA Homology | ATPase activity | HOM03M000149 |
GO:0017111 | IEA | PLAZA Homology | nucleoside-triphosphatase activity | HOM03M000149 |
GO:0022857 | IEA | PLAZA Homology | transmembrane transporter activity | HOM03M000149 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016020 | IEA | Genome Project | membrane | |
GO:0016021 | IEA | InterPro | integral to membrane | |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G21180 |
GO:0031224 | IEA | PLAZA Homology | intrinsic to membrane | HOM03M000149 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR023298 | P-type ATPase, transmembrane domain |
IPR001757 | Cation-transporting P-type ATPase |
IPR023299 | P-type ATPase, cytoplasmic domain N |
IPR023214 | HAD-like domain |
IPR006068 | Cation-transporting P-type ATPase, C-terminal |
IPR018303 | P-type ATPase, phosphorylation site |
IPR006408 | Calcium-transporting P-type ATPase, subfamily IIB |
IPR004014 | Cation-transporting P-type ATPase, N-terminal |
IPR008250 | P-type ATPase, A domain |
IPR024750 | Calcium-transporting P-type ATPase, N-terminal autoinhibitory domain |
Mapman id | Description |
---|---|
30.3 | signalling.calcium |
No SignalP domains detected for this gene.