Gene: PT10G24600 (Populus trichocarpa)

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Gene Identifier
PT10G24600
Transcript Identifier
PT10G24600.1
Gene Type
Coding gene
Location
Chr10 : 22040561-22049281 : positive

Family

Gene family
HOM03M000133
(353 genes in 16 species)
specific family
Subfamily
ORTHO03M000443
(14 genes in 11 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Putative ATP-dependent RNA helicase DHX30
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G246000.1
idPAC:26982585

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003725IEAGenome Projectdouble-stranded RNA binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0005524IEAGenome ProjectATP binding
GO:0008026IEAGenome ProjectATP-dependent helicase activity
GO:0004386IEAGenome Projecthelicase activity
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000133
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03M000133
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000133
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000133
GO:0016887IEAPLAZA HomologyATPase activityHOM03M000133
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03M000133
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03M000133

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001650Helicase, C-terminal
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR007502Helicase-associated domain
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR014720Double-stranded RNA-binding domain
IPR011709Domain of unknown function DUF1605

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.