Gene: PT10G21860 (Populus trichocarpa)

Overview top

Gene Identifier
PT10G21860
Transcript Identifier
PT10G21860.1
Gene Type
Coding gene
Location
Chr10 : 20467382-20468860 : positive

Family

Gene family
HOM03M000241
(217 genes in 16 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Elongation factor 1 alpha
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G218600.2
idPAC:26981299

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006414IEAInterProtranslational elongation
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0006412IEAPLAZA HomologytranslationHOM03M000241

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924IEAGenome ProjectGTPase activity
GO:0005525IEAGenome ProjectGTP binding
GO:0003746IEAInterProtranslation elongation factor activity
GO:0032561IEAPLAZA Homologyguanyl ribonucleotide bindingHOM03M000241
GO:0019001IEAPLAZA Homologyguanyl nucleotide bindingHOM03M000241
GO:0008135IEAPLAZA Homologytranslation factor activity, nucleic acid bindingHOM03M000241

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G60390 AT1G07940 AT1G07930 AT1G07920
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G07920
GO:0005622IEAPLAZA HomologyintracellularHOM03M000241

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004161Translation elongation factor EFTu/EF1A, domain 2
IPR000795Elongation factor, GTP-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR004539Translation elongation factor EF1A, eukaryotic/archaeal
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR009000Translation protein, beta-barrel domain
IPR004160Translation elongation factor EFTu/EF1A, C-terminal

Mapman id Description
29.2.4protein.synthesis.elongation
No SignalP domains detected for this gene.