Gene: PT10G18870 (Populus trichocarpa)

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Gene Identifier
PT10G18870
Transcript Identifier
PT10G18870.1
Gene Type
Coding gene
Location
Chr10 : 18460077-18466640 : negative

Family

Gene family
HOM03M002425
(35 genes in 15 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
X1-type zinc finger protein NFXL2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G188700.1
idPAC:26980207

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:2000037ISOPLAZA Integrative Orthologyregulation of stomatal complex patterningAT5G05660
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT5G05660
GO:0042335ISOPLAZA Integrative Orthologycuticle developmentAT5G05660
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT5G05660
GO:0009908ISOPLAZA Integrative Orthologyflower developmentAT5G05660
GO:0007623ISOPLAZA Integrative Orthologycircadian rhythmAT5G05660
GO:0010310ISOPLAZA Integrative Orthologyregulation of hydrogen peroxide metabolic processAT5G05660
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G05660
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M002425

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0008270IEAGenome Projectzinc ion binding
GO:0005515IEAInterProprotein binding
GO:0000987ISOPLAZA Integrative Orthologycore promoter proximal region sequence-specific DNA bindingAT5G05660

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000967Zinc finger, NF-X1-type
IPR019786Zinc finger, PHD-type, conserved site
IPR001841Zinc finger, RING-type

Mapman id Description
27.3.67RNA.regulation of transcription.putative transcription regulator
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBNF-X1