Gene: PT10G16380 (Populus trichocarpa)

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Gene Identifier
PT10G16380
Transcript Identifier
PT10G16380.1
Gene Type
Coding gene
Location
Chr10 : 16820678-16824437 : negative

Family

Gene family
HOM03M000188
(260 genes in 15 species)
specific family
Subfamily
ORTHO03M000073
(37 genes in 12 species)
specific family

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Descriptions

Description (AnnoMine)
Protein argonaute
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G163800.1
idPAC:26980433

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016246ISOPLAZA Integrative OrthologyRNA interferenceOS03G33650 AT1G69440
GO:0010492ISOPLAZA Integrative Orthologymaintenance of shoot apical meristem identityOS03G33650
GO:0010599ISOPLAZA Integrative Orthologyproduction of lsiRNA involved in RNA interferenceAT1G69440
GO:0035196ISOPLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNAAT1G69440
GO:0010267ISOPLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interferenceAT1G69440
GO:0010050ISOPLAZA Integrative Orthologyvegetative phase changeAT1G69440
GO:0040034ISOPLAZA Integrative Orthologyregulation of development, heterochronicAT1G69440
GO:0035195ISOPLAZA Integrative Orthologygene silencing by miRNAAT1G69440

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0003676IEAInterPronucleic acid binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT1G69440

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003100Argonaute/Dicer protein, PAZ domain
IPR003165Stem cell self-renewal protein Piwi
IPR012337Ribonuclease H-like domain
IPR014811Domain of unknown function DUF1785

Mapman id Description
27.3.36RNA.regulation of transcription.Argonaute
33.99development.unspecified
No SignalP domains detected for this gene.