Gene: PT10G13550 (Populus trichocarpa)

Overview top

Gene Identifier
PT10G13550
Transcript Identifier
PT10G13550.1
Gene Type
Coding gene
Location
Chr10 : 14929670-14944705 : positive

Family

Gene family
HOM03M003771
(24 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine)
6-hydroxy-3-cyclohexene-1-carboxylate synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G135500.1
idPAC:26980358

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0009234IEAInterPromenaquinone biosynthetic process
GO:0009063IEAInterProcellular amino acid catabolic process
GO:0042550ISOPLAZA Integrative Orthologyphotosystem I stabilizationAT1G68890
GO:0042372ISOPLAZA Integrative Orthologyphylloquinone biosynthetic processAT1G68890
GO:0009233IEAPLAZA Homologymenaquinone metabolic processHOM03M003771

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016787IEAGenome Projecthydrolase activity
GO:0003824IEAGenome Projectcatalytic activity
GO:0030976IEAGenome Projectthiamine pyrophosphate binding
GO:0000287IEAInterPromagnesium ion binding
GO:0016836IEAInterProhydro-lyase activity
GO:0070204IEAInterPro2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011766Thiamine pyrophosphate enzyme, C-terminal TPP-binding
IPR004433Menaquinone biosynthesis protein MenD
IPR012001Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
IPR010196O-succinylbenzoic acid (OSB) synthetase
IPR013342Mandelate racemase/muconate lactonizing enzyme, C-terminal
IPR018110Mandelate racemase/muconate lactonizing enzyme, conserved site

Mapman id Description
18.5.2.8.1Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO
No SignalP domains detected for this gene.