Gene: PT10G08950 (Populus trichocarpa)

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Gene Identifier
PT10G08950
Transcript Identifier
PT10G08950.1
Gene Type
Coding gene
Location
Chr10 : 11305932-11310227 : negative

Family

Gene family
HOM03M000226
(224 genes in 16 species)
specific family
Subfamily
ORTHO03M000091
(31 genes in 12 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Linoleate 9S-lipoxygenase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G089500.1
idPAC:26980122

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingOS03G52860 AT1G55020
GO:0051707ISOPLAZA Integrative Orthologyresponse to other organismOS03G52860
GO:0040007ISOPLAZA Integrative OrthologygrowthAT1G55020
GO:0030397ISOPLAZA Integrative Orthologymembrane disassemblyAT1G55020
GO:0009816ISOPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT1G55020
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT1G55020
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT1G55020
GO:0009695ISOPLAZA Integrative Orthologyjasmonic acid biosynthetic processAT1G55020
GO:0006952ISOPLAZA Integrative Orthologydefense responseAT1G55020
GO:0034440ISOPLAZA Integrative Orthologylipid oxidationAT1G55020 AT3G22400
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT1G55020 AT3G22400
GO:0010311ISOPLAZA Integrative Orthologylateral root formationAT1G55020 AT3G22400
GO:1900366ISOPLAZA Integrative Orthologynegative regulation of defense response to insectAT3G22400

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016702IEAGenome Projectoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872IEAGenome Projectmetal ion binding
GO:0005515IEAGenome Projectprotein binding
GO:0005506IEAInterProiron ion binding
GO:0016165IEAInterProlinoleate 13S-lipoxygenase activity
GO:1990136ISOPLAZA Integrative Orthologylinoleate 9S-lipoxygenase activityAT1G55020 AT3G22400
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03M000226
GO:0016701IEAPLAZA Homologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygenHOM03M000226

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmOS03G52860
GO:0009536ISOPLAZA Integrative OrthologyplastidAT1G55020 AT3G22400
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G22400

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013819Lipoxygenase, C-terminal
IPR020834Lipoxygenase, conserved site
IPR027433Lipoxygenase, domain 3
IPR001024PLAT/LH2 domain
IPR001246Lipoxygenase, plant
IPR008976Lipase/lipooxygenase, PLAT/LH2
IPR020833Lipoxygenase, iron binding site
IPR000907Lipoxygenase

Mapman id Description
17.7.1.2hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
No SignalP domains detected for this gene.