Gene: PT10G06500 (Populus trichocarpa)

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Gene Identifier
PT10G06500
Transcript Identifier
PT10G06500.1
Gene Type
Coding gene
Location
Chr10 : 9247734-9262551 : negative

Family

Gene family
HOM03M003724
(24 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
protein MutS
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G065000.1
idPAC:26979863

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006298IEAGenome Projectmismatch repair
GO:0006281IEAGenome ProjectDNA repair
GO:0032042ISOPLAZA Integrative Orthologymitochondrial DNA metabolic processAT3G24320
GO:0000002ISOPLAZA Integrative Orthologymitochondrial genome maintenanceAT3G24320
GO:0009408ISOPLAZA Integrative Orthologyresponse to heatAT3G24320

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAGenome ProjectATP binding
GO:0030983IEAGenome Projectmismatched DNA binding
GO:0004518IEAGenome Projectnuclease activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT3G24320
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G24320

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000305GIY-YIG nuclease superfamily
IPR016151DNA mismatch repair protein MutS, N-terminal
IPR005748DNA mismatch repair protein MutS, type 1
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR000432DNA mismatch repair protein MutS, C-terminal
IPR007695DNA mismatch repair protein MutS-like, N-terminal

Mapman id Description
28.2DNA.repair
No SignalP domains detected for this gene.